These Sourdough Chocolate Chip Cookies are made with brown butter, semisweet chocolate, and a sprinkle of sea salt. They have an incredible flavor and are perfect for using up sourdough discard! Recipe includes a how-to video!

Sourdough Discard Chocolate Chip Cookies
Never did I ever think this internet space of mine would host a recipe asโฆ interestingโฆ as sourdough chocolate chip cookies. However, after falling headfirst into the world of sourdough baking, Iโve become obsessed with finding new ways to use up my discard, and it wasnโt long before my love of desserts and my love of sourdough merged.
Todayโs recipe blends these two worlds beautifully, and it surprised me how quickly I fell head over heels for this recipe. In fact, itโs my new favorite chocolate chip cookie, yes, even more than my go-to best chocolate chip cookiesโand I never thought Iโd find a cookie that topped those. If you love that recipe, just wait until you try this one.
The flavor is unparalleled, rich and deep, intense and chocolatey. Top everything off with a sprinkle of sea salt and itโs true cookie bliss.

Itโs not as simple as just adding discard to any old cookie recipe
When developing this recipe I knew that simply adding sourdough discard to a standard chocolate chip cookie dough wouldnโt work. At least, it wouldnโt yield the chewy, flavorful cookie I was seeking. Adding that much liquid was bound to result in too-thick, cakey cookies, which I definitely didnโt want.
I took a few notes from my experience with developing other high-liquid recipes (like my pumpkin cookies) and creatively reduced the liquid and water content in a few ways. We use only egg yolks (no whites) and brown the butter (to cook out the excess water), which takes the cookie to even higher heights. The end result is oft and chewy cookies that arenโt at all cakey and stay soft for days!
What makes these cookies so amazing?
- Sourdough discard adds unique depth and wonderful flavor (itโs not at all sour here) thatโs hard to put your finger on, but so good. Likeโฆ so good.
- Browned butter imparts a rich, nutty taste that is unparalleled.
- Chopped chocolate and sea salt accents the other flavors perfectly.
What You Need

Here are the key ingredients in these sourdough discard chocolate chip cookies:
- Sourdough discard. If you use my sourdough starter recipe, the amount you will discard there is the exact same amount needed here today. Saving sourdough discard for other recipes (like my sourdough pancakes!) is a wonderful way to reduce food waste (and a great excuse to eat more cookies)!
- Butter. To compensate for the discard and reduce the water content in the dough, weโll brown our butter. This extra step creates an AMAZING flavor as well, so itโs worth it. If youโve never browned butter before, I have a post on how to brown butter that might be helpful for you.
- Egg yolks. Discarding the egg whites and just using the yolks also helps to reduce the water in our cookie dough.
- Chocolate. Semisweet or 60% cacao chocolate baking bars are my preference in this recipe. You can use whatever type of chocolate you prefer though, such as semisweet, milk, or dark chocolate. Despite these being sourdough discard chocolate chip cookies, I recommend buying bars and chopping them yourself. This allows the chocolate to distribute beautifully through the cookies and melt more than regular chocolate chips would. It just also adds to that gourmet feel! Yes, of course actual chips will work instead, but I do recommend you try them with chopped chocolate at least once.
- Vanilla extract. This also adds depth of flavor to the cookies. If you have homemade vanilla, now is the time to whip it out.
- Sea salt. Adding a sprinkle of flaky sea salt on top of the baked cookies enhances the sweet and savory flavors, creating a delightful contrast.
SAMโS TIP: I think these sourdough discard chocolate chip cookies taste best when the dough has had quite a bit of time to chill; in fact, I like to let mine sit overnight before scooping and baking. Technically the dough will be firm enough that you can bake it right away (the cookies would just be a smidge flatter), but if you have the patience to let the flavor develop, you will be rewarded with amazing cookies!
Remember, this is just an overview of the ingredients I used and why. For the full recipe please scroll down to the bottom of the post!
How to Make Sourdough Chocolate Chip Cookies

- Brown the butter โ Cook the butter over medium low heat until it melts, then increase the heat to medium. Stir constantly as the butter bubbles and pops (itโs the most pleasant sound in the world). Once the popping slows, look for golden brown specks forming in the bottom of the pan. Remove from the heat, pour into a heatproof bowl, and let cool completely.
- Add the wet ingredients โ Add the sugars, egg yolks, and vanilla to the cooled butter, then stir in the sourdough discard.
- Add the dry ingredients โ Whisk together the dry ingredients in a separate bowl, then gradually stir them into the wet ingredients.
- Chocolate and chill โ Add the chopped chocolate and fold it into the dough until incorporated. Cover the bowl with plastic wrap and place in the fridge to chill for at least 30 minutes (I like to let mine chill overnight for the best flavor).

- Scoop and bake โ Roll 1 ยฝ tablespoon sized cookie dough balls between your palms before placing on a parchment lined baking sheet. Bake for 350F for 10-12 minutes, or until the edges start to turn golden brown.
- Salt and enjoy! Sprinkle the warm cookies with sea salt and let them cool completely on their baking sheets before enjoying.
SAMโS TIP: Never put cookie dough on a hot cookie sheet! Doing this can cause your dough to spread and result in super thin cookies. If you donโt have multiple cookie sheets, let your dough chill in the fridge in between batches while your cookie sheets cool down.

Frequently Asked Questions
Yes! In fact, I think these sourdough chocolate chip cookies tastes best after chilling the dough overnight. You can make this dough up to 4 days in advance, just note that if you do chill it longer than 60 minutes, it will be a bit tough to scoop at first (just let it sit at room temperature until scoopable).
I developed these sourdough discard chocolate chip cookies as a way to 1) use my sourdough discard instead of discarding it and 2) create an incredibly flavored cookie thatโs a bit different from the norm.
No matter the recipe type, sourdough discard imparts flavor and also has some nutritional benefits too. Thatโs not to say these cookies should be considered health food though!
Yes! Follow the chilling step first, then freeze according to the instructions for drop cookies in my how to freeze cookie dough post.

I seriously canโt wait for you to try these!
Enjoy!
Letโs bake together!ย Iโll be walking you through all the steps in my written recipe andย videoย below! If you try this recipe, be sure to tag me onย Instagram, and you can also find me onย YouTubeย andย Facebook

Sourdough Chocolate Chip Cookies
Ingredients
- 1 cup (226 g) unsalted butter
- 1 cup (200 g) light brown sugar firmly packed
- โ cup (133 g) granulated sugar
- 2 large egg yolks room temperature preferred
- 1 ยฝ teaspoons vanilla extract
- โ cup (140 g) sourdough discard
- 2 ยพ cup (340 g) all-purpose flour
- 1 teaspoon baking powder
- 1 teaspoon baking soda
- ยพ teaspoon salt
- 1 ยฝ cups (255 g) semisweet chocolate chips or 6 oz chopped semisweet or dark chocolate bar
- Flaky sea salt for sprinkling
Recommended Equipment
Instructions
- Brown the butter. In a saucepan, melt butter over medium-low heat. Increase heat to medium and cook, stirring constantly. Butter will sizzle and pop. Once popping slows or stops and you notice the butter is beginning to turn golden brown (there will be brown flecks on the bottom of your pan) immediately remove from heat. Pour into a large heatproof mixing bowl and allow to cool until no longer warm to the touch before proceeding.1 cup (226 g) unsalted butter
- Once butter has cooled, add sugars, eggs yolks, and vanilla extract and stir until well-combined.1 cup (200 g) light brown sugar, โ cup (133 g) granulated sugar, 2 large egg yolks, 1 ยฝ teaspoons vanilla extract
- Add sourdough discard and mix well, until fully incorporated.โ cup (140 g) sourdough discard
- In a separate bowl, whisk together the all-purpose flour, baking powder, baking soda, and salt.2 ยพ cup (340 g) all-purpose flour, 1 teaspoon baking powder, 1 teaspoon baking soda, ยพ teaspoon salt
- Gradually add the dry ingredients to the wet, stirring until thoroughly combined.
- Use a spatula to fold in chopped chocolate until well incorporated.1 ยฝ cups (255 g) semisweet chocolate chips or 6 oz chopped semisweet or dark chocolate bar
- Cover with plastic wrap and chill for at least 30-60 minutes (or, my preference, overnight).
- Once dough is ready to bake, preheat oven to 350F (175C) and line a baking sheet with parchment paper.
- Scoop chilled dough into 1 ยฝ Tablespoon-sized balls, for neat, uniform cookies roll between your palms to make them round. Place on prepared baking sheet, spacing cookies at least 2 inches apart.
- Bake for 10-12 minutes, until edges are beginning to turn golden brown (centers will still be soft and may appear slightly underdone).
- Within several minutes of removing cookies from oven, sprinkle all over with flaky sea salt.Flaky sea salt
- Allow cookies to cool completely on baking sheet before removing and enjoying.
Notes
Storing
Store cooled cookies in an airtight container at room temperature for up to a week.Nutrition
Nutritional information is based on third-party calculations and should be considered an estimate only. Actual nutritional content will vary based upon brands used, measuring methods, cooking method, portion sizes, and more.










Kim
Could these be made with bread flour?
Sam Merritt
Hi Kim! While it is possible, I wouldnโt recommend it.
Jibrat
Iโve made these cookie so many times. I put it in a Ziploc make them into tiny squares and make a couple at a time when Iโm craving a lil sweet snack. Love this site!!!
Candi
Hands down THE BEST choco chip cookie recipe ever!! Iโm saving this one, sooooo good!!!
Emily @ Sugar Spun Run
So glad you enjoyed it so much, Candi! ๐ฉท
Des
my dough was extremely thick and hard to mix so i caved and added about a tbsp of milk, i havent baked them yet so ๐ค. i wonder if it was because my discard wasnโt an even 1/1/1 ratio
Emily @ Sugar Spun Run
Did you weigh your flour? It sounds like there might have been too much flour in the dough.
Des
no in was going to but my scale battery died after i weighed my discard. but the discard was a 2-1 rye flour to water ratio so i think that was my issue, will be cooking a batch at noon so ill know soon
Shauna Freeman
Can you add walnuts?
Emily @ Sugar Spun Run
Sure! Enjoy ๐
Nicole
Mine were really flat ๐ was it my discard?
Emily @ Sugar Spun Run
Oh no! Are you making any substitutions? Was your butter sufficiently browned and cooled? Did you weigh your flour?
Nicole
No adjustments! They just didnโt rise that much!
Clara
THE BEST COOKIES EVER I SWEAR I bake them for all my friends birthdays, I made a batch of 30 and froze them lasted a month
Sam Merritt
Iโm so glad you enjoyed them so much, Clara! ๐
Amy
could you freeze the raw dough and still have them bake well?
Sam Merritt
Hi Amy! That should work just fine. ๐
Cassie Myers
Yes!!!! I make 1 1/2 โ 3 batches at a time. I put the dough in a 1 gallon bag and refrigerate for 2-3 days. Then bake or double bag and freeze. I put it in the fridge from freezer the night before Iโm going to bake. They turn out amazing every time.
Ruth
So delicious, and a great way to use discard. Chewy, not oily, not โone noteโ sweet. They freeze beautifully. I maintain a rye starter, and it works perfectly for this with AP flour in the dough as written. Iโve made the recipe three times. Everyone loves them!
Katy
These are delicious! Even my son who claims not to like chocolate chip cookies (??!?!) loved them. Iโm thinking of making them again, but as a bar cookie. Any advice for adjusting the baking time/temperature?
Sam Merritt
Hi Katy! Iโm so glad they were such a hit! Unfortunately I have not done them as a bar. I wouldnโt change the temperature, but they are going to take a bit longer to bake. Let me know how it turns out if you try it. ๐
Julie Chappell
Oh My!!! These are The best cookies!!.
So good!๐
Nixie
Best cookie recipe Iโve ever found!
Gabby
Made these twice already โ huge hit in our house!